SMTL ID : 3fbz.3 (4 other biounits)

Crystal structure of ORF140 of the archaeal virus Acidianus Filamentous Virus 1 (AFV1)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

3 x BOG: octyl beta-D-glucopyranoside(Non-covalent)

BOG.1: 7 residues within 4Å: Chain A: Y.49, M.52, M.53, E.82, E.83, A.85, H.86 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:Y.49, A:A.85, A:H.86 Hydrogen bonds: A:E.83 Water bridges: A:E.83 Salt bridges: A:H.86 BOG.2: 5 residues within 4Å: Chain A: M.34, A.35, S.37, V.38, S.41 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:V.38, A:V.38 Hydrogen bonds: A:S.41, A:S.41 BOG.3: 8 residues within 4Å: Chain A: I.42, D.45, W.46, Q.48, Y.49, M.52, W.89, N.93 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:I.42, A:W.46, A:Y.49 Hydrogen bonds: A:W.89, A:N.93

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Goulet, A. et al., Acidianus filamentous virus 1 coat proteins display a helical fold spanning the filamentous archaeal viruses lineage. Proc.Natl.Acad.Sci.USA (2009)

Release Date

2009-11-10

Peptides

Putative uncharacterized protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Putative uncharacterized protein

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