SMTL ID : 3ffi.2 (1 other biounit)

HIV-1 RT with pyridone non-nucleoside inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-2-2-mer

Ligands

2 x 3OB: 3-chloro-5-({6-[2-(3,4-dihydroisoquinolin-2(1H)-yl)-2-oxoethyl]-3-(dimethylamino)-2-oxo-1,2-dihydropyridin-4-yl}oxy)benzonitrile(Non-covalent)

3OB.1: 20 residues within 4Å: Chain A: P.96, L.101, K.102, K.103, K.104, K.105, S.106, V.107, V.180, Y.182, Y.189, V.190, G.191, P.226, F.228, W.230, L.235, H.236, P.237, Y.319 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.101, A:L.101, A:L.101, A:V.107, A:V.107, A:Y.189, A:P.226, A:P.226, A:L.235, A:Y.319 Hydrogen bonds: A:K.102, A:K.104 pi-Stacking: A:Y.189, A:W.230 3OB.2: 20 residues within 4Å: Chain C: P.96, L.101, K.102, K.103, K.104, K.105, S.106, V.107, V.180, Y.182, Y.189, V.190, G.191, P.226, F.228, W.230, L.235, H.236, P.237, Y.319 14 PLIP interactions: 14 interactions with chain C Hydrophobic interactions: C:L.101, C:L.101, C:L.101, C:V.107, C:V.107, C:Y.189, C:P.226, C:P.226, C:L.235, C:Y.319 Hydrogen bonds: C:K.102, C:K.104 pi-Stacking: C:Y.189, C:W.230

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kennedy-Smith, J. et al., Pyridone Diaryl Ether Non-Nucleoside Inhibitors of HIV-1 Reverse Transcriptase. To be Published

Release Date

2009-12-15

Peptides

Reverse transcriptase/ribonuclease H: AC
RT p51: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
B

D
B

Reverse transcriptase/ribonuclease H

RT p51

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