SMTL ID : 3fgu.1

Catalytic complex of Human Glucokinase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

monomer

Ligands

1 x BGC: beta-D-glucopyranose(Non-covalent)

BGC.1: 16 residues within 4Å: Chain A: S.156, F.157, P.158, T.173, K.174, N.209, D.210, T.211, I.230, G.234, C.235, N.236, E.261, Q.292, E.295 Ligands: ANP.2 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:K.174, A:N.209, A:N.209, A:C.235, A:N.236, A:E.261, A:E.261, A:Q.292 Salt bridges: A:K.174

1 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.2: 18 residues within 4Å: Chain A: G.85, K.174, D.210, I.230, G.232, T.233, G.234, G.300, K.301, T.337, R.338, S.341, G.415, S.416, V.417, L.420 Ligands: BGC.1, MG.3 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:K.174, A:K.174, A:D.210, A:G.232, A:T.233, A:T.233, A:G.234, A:S.341, A:S.341, A:S.416, A:S.416 Water bridges: A:T.87, A:R.90, A:T.337, A:T.337, A:R.338

1 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 2 residues within 4Å: Chain A: D.210 Ligands: ANP.2 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.210, H2O.4

1 x K: POTASSIUM ION(Non-covalent)

K.4: 5 residues within 4Å: Chain A: M.243, V.246, V.249, G.251, D.252 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:M.243, A:V.246, A:V.249, A:G.251

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Petit, P. et al., The active conformation of human glucokinase is not altered by allosteric activators. Acta Crystallogr.,Sect.D (2011)

Release Date

2009-12-15

Peptides

Glucokinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Glucokinase

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