SMTL ID : 3fkb.1

Structure of NDPK H122G and tenofovir-diphosphate

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.65 Å
Oligo State
homo-hexamer
Ligands
5 x TNM: [(2R)-1-(6-AMINOPURIN-9-YL)PROPAN-2-YL]OXYMETHYL-PHOSPHONOOXY-PHOSPHINIC ACID(Non-covalent)
6 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
2 x GOL: GLYCEROL(Non-functional Binders)
1 x TNV: [2-(6-AMINO-9H-PURIN-9-YL)-1-METHYLETHOXY]METHYL-TRIPHOSPHATE(Non-covalent)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Koch, K. et al., Nucleoside diphosphate kinase and the activation of antiviral phosphonate analogs of nucleotides: binding mode and phosphorylation of tenofovir derivatives. Nucleosides Nucleotides Nucleic Acids (2009)
Release Date
2009-09-29
Peptides
Nucleoside diphosphate kinase, cytosolic: ABCDEF
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
D
E
E
F
F

Nucleoside diphosphate kinase, cytosolic

Toggle Identical (ABCF) Toggle Identical (DE)

Related Entries With Identical Sequence

1b4s.1 | 1f3f.1 | 1mn9.1 | 4cp5.1 | 4cp5.2