SMTL ID : 3fkn.1

P38 kinase crystal structure in complex with RO7125

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x FKN: 3-[2-chloro-5-(methylsulfonyl)phenyl]-6-(2,4-difluorophenoxy)-1H-pyrazolo[3,4-d]pyrimidine(Non-covalent)

FKN.1: 19 residues within 4Å: Chain A: V.42, Y.47, V.50, A.63, K.65, L.87, I.96, L.98, L.116, V.117, T.118, H.119, L.120, M.121, G.122, A.123, D.124, A.169, L.179 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:Y.47, A:K.65, A:L.87, A:I.96, A:T.118, A:L.120 Hydrogen bonds: A:H.119, A:M.121 pi-Stacking: A:Y.47

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Arora, N. et al., Mapping Binding Pocket Volume: Potential Applications towards Ligand Design and Selectivity. To be Published

Release Date

2009-12-22

Peptides

Mitogen-activated protein kinase 14: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 14

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