SMTL ID : 3fmo.1

Crystal structure of the nucleoporin Nup214 in complex with the DEAD-box helicase Ddx19

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.51 Å

Oligo State

hetero-1-1-mer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain A: L.50, I.61, F.128, S.129 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:I.61, A:S.129

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.2: 16 residues within 4Å: Chain B: N.69, L.70, F.94, F.112, R.114, P.115, S.116, Q.119, Q.139, S.140, G.141, T.142, G.143, K.144, T.145, A.146 16 PLIP interactions: 16 interactions with chain B Hydrogen bonds: B:N.69, B:R.114, B:S.116, B:Q.119, B:Q.139, B:G.141, B:T.142, B:G.143, B:K.144, B:T.145, B:T.145, B:T.145, B:A.146 Salt bridges: B:K.144 pi-Stacking: B:F.112, B:F.112

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Napetschnig, J. et al., Structural and functional analysis of the interaction between the nucleoporin Nup214 and the DEAD-box helicase Ddx19. Proc.Natl.Acad.Sci.USA (2009)

Release Date

2009-05-19

Peptides

Nuclear pore complex protein Nup214: A
ATP-dependent RNA helicase DDX19B: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Nuclear pore complex protein Nup214

ATP-dependent RNA helicase DDX19B

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