SMTL ID : 3fo9.1 (1 other biounit)

Crystal structure of aldolase antibody 33F12 Fab' in complex with hapten 1,3-diketone

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-1-1-mer

Ligands

1 x DIK: 5-{[4-(5-methyl-3-oxohex-4-en-1-yl)phenyl]amino}-5-oxopentanoic acid(Covalent)

DIK.1: 12 residues within 4Å: Chain A: H.31, N.39, Y.41, S.94, G.96, F.103 Chain B: W.33, K.99, Y.101, F.102, Y.103, W.108 11 PLIP interactions: 7 interactions with chain B, 4 interactions with chain A Hydrophobic interactions: B:W.33, B:W.33, B:K.99, B:Y.103, B:W.108, A:Y.41, A:F.103 Hydrogen bonds: B:K.99 pi-Stacking: B:Y.101, A:F.37 Salt bridges: A:H.31

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhu, X. et al., Direct observation of an enamine intermediate in amine catalysis. J.Am.Chem.Soc. (2009)

Release Date

2009-12-22

Peptides

Immunoglobulin IGG2A - light chain: A
Immunoglobulin IGG2A - heavy chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

Immunoglobulin IGG2A - light chain

Immunoglobulin IGG2A - heavy chain

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