SMTL ID : 3fr3.1

Tetramerization and Cooperativity in Plasmodium falciparum glutathione transferase are mediated by the atypic loop 113-118

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-tetramer

Ligands

4 x GDS: OXIDIZED GLUTATHIONE DISULFIDE(Non-covalent)

GDS.1: 18 residues within 4Å: Chain A: Y.9, F.10, A.12, R.13, G.14, K.15, F.45, Q.58, V.59, P.60, Q.71, S.72 Chain B: A.115, N.116, E.117, T.118, K.172 Chain C: D.105 23 PLIP interactions: 16 interactions with chain A, 1 interactions with chain C, 6 interactions with chain B Hydrophobic interactions: A:A.12, A:K.15, A:Q.58 Hydrogen bonds: A:R.13, A:G.14, A:V.59, A:V.59, A:Q.71, A:Q.71, A:S.72, C:D.105, B:T.118 Water bridges: A:D.11, A:G.14, A:V.59, A:Q.73, A:N.111, A:D.168, B:A.114, B:E.117, B:T.118, B:T.119 Salt bridges: B:K.172 GDS.2: 16 residues within 4Å: Chain A: A.115, E.117, T.118 Chain B: Y.9, F.10, A.12, R.13, G.14, K.15, F.45, Q.58, V.59, P.60, Q.71, S.72 Chain D: D.105 20 PLIP interactions: 15 interactions with chain B, 3 interactions with chain A, 2 interactions with chain D Hydrogen bonds: B:Y.9, B:R.13, B:G.14, B:Q.58, B:V.59, B:V.59, B:Q.71, B:Q.71, B:S.72, A:A.115, A:E.117, A:T.118, D:D.105 Water bridges: B:K.15, B:Q.73, B:D.168, B:D.168, D:K.127 Salt bridges: B:K.15, B:K.49 GDS.3: 18 residues within 4Å: Chain A: D.105 Chain C: Y.9, F.10, A.12, R.13, G.14, K.15, F.45, Q.58, V.59, P.60, Q.71, S.72 Chain D: A.115, N.116, E.117, T.118, K.172 23 PLIP interactions: 16 interactions with chain C, 1 interactions with chain A, 6 interactions with chain D Hydrophobic interactions: C:A.12, C:K.15, C:Q.58 Hydrogen bonds: C:R.13, C:G.14, C:V.59, C:V.59, C:Q.71, C:Q.71, C:S.72, A:D.105, D:T.118 Water bridges: C:D.11, C:G.14, C:V.59, C:Q.73, C:N.111, C:D.168, D:A.114, D:E.117, D:T.118, D:T.119 Salt bridges: D:K.172 GDS.4: 16 residues within 4Å: Chain B: D.105 Chain C: A.115, E.117, T.118 Chain D: Y.9, F.10, A.12, R.13, G.14, K.15, F.45, Q.58, V.59, P.60, Q.71, S.72 20 PLIP interactions: 15 interactions with chain D, 3 interactions with chain C, 2 interactions with chain B Hydrogen bonds: D:Y.9, D:R.13, D:G.14, D:Q.58, D:V.59, D:V.59, D:Q.71, D:Q.71, D:S.72, C:A.115, C:E.117, C:T.118, B:D.105 Water bridges: D:K.15, D:Q.73, D:D.168, D:D.168, B:K.127 Salt bridges: D:K.15, D:K.49

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Perbandt, M. et al., Tetramerization and Cooperativity in Plasmodium falciparum glutathione transferase are mediated by the atypic loop 113-118. To be Published

Release Date

2010-01-26

Peptides

Glutathione S-transferase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Glutathione S-transferase