SMTL ID : 3fsd.1

Crystal structure of NTF2-like protein of unknown function in nutrient uptake (YP_427473.1) from RHODOSPIRILLUM RUBRUM ATCC 11170 at 1.70 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-dimer

Ligands

2 x UNL: UNKNOWN LIGAND

UNL.1: 9 residues within 4Å: Chain A: F.45, D.47, H.48, H.58, T.95, F.104, E.106, F.110, C.130 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.48, A:E.106 Water bridges: A:H.58 UNL.4: 9 residues within 4Å: Chain B: F.45, D.47, H.48, H.58, T.95, F.104, E.106, F.110, C.130 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:H.48, B:T.95 Water bridges: B:H.58, B:H.58

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: A.17, E.20, A.77, V.79 2 PLIP interactions: 2 interactions with chain A Water bridges: A:E.20, A:E.21 EDO.3: 7 residues within 4Å: Chain A: R.80 Chain B: D.42, L.43, A.44, V.52, K.53, T.54 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:R.80, B:L.43 EDO.5: 4 residues within 4Å: Chain B: A.17, E.20, A.77, V.79 3 PLIP interactions: 3 interactions with chain B Water bridges: B:E.20, B:E.20, B:E.21 EDO.6: 7 residues within 4Å: Chain A: D.42, L.43, A.44, V.52, K.53, T.54 Chain B: R.80 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:R.80, A:L.43

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of NTF2-like protein of unknown function in nutrient uptake (YP_427473.1) from RHODOSPIRILLUM RUBRUM ATCC 11170 at 1.70 A resolution. To be published

Release Date

2009-02-10

Peptides

NTF2-like protein of unknown function in nutrient uptake: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

NTF2-like protein of unknown function in nutrient uptake