- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.95 Å
- Oligo State
- homo-tetramer
- Ligands
- 22 x TSU: PARA-TOLUENE SULFONATE(Non-covalent)
- 2 x IMD: IMIDAZOLE(Non-covalent)
IMD.7: 6 residues within 4Å:- Chain A: A.98, S.99, P.100, D.127, G.128
- Chain D: L.227
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:A.98
IMD.27: 6 residues within 4Å:- Chain B: L.227
- Chain C: A.98, S.99, P.100, D.127, G.128
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:A.98, C:D.127
- 8 x GOL: GLYCEROL(Non-functional Binders)
GOL.8: 10 residues within 4Å:- Chain A: F.194, S.195, S.196, A.197, G.202, A.203, I.204, I.205, T.241
- Ligands: TSU.4
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:S.195, A:S.195, A:G.202, A:I.204
GOL.9: 10 residues within 4Å:- Chain A: L.227, P.230, N.250, A.251, F.252
- Chain D: L.104, L.246, R.249, N.250, A.251
4 PLIP interactions:3 interactions with chain A, 1 interactions with chain D- Hydrogen bonds: A:A.251, D:A.251
- Water bridges: A:L.227, A:G.231
GOL.10: 1 residues within 4Å:- Chain A: A.185
No protein-ligand interaction detected (PLIP)GOL.17: 3 residues within 4Å:- Chain B: W.90, E.117, F.118
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:E.117
- Water bridges: B:W.90, B:F.118
GOL.28: 10 residues within 4Å:- Chain C: F.194, S.195, S.196, A.197, G.202, A.203, I.204, I.205, T.241
- Ligands: TSU.24
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:S.195, C:S.195, C:G.202, C:I.204
GOL.29: 10 residues within 4Å:- Chain B: L.104, L.246, R.249, N.250, A.251
- Chain C: L.227, P.230, N.250, A.251, F.252
4 PLIP interactions:3 interactions with chain C, 1 interactions with chain B- Hydrogen bonds: C:A.251, B:A.251
- Water bridges: C:L.227, C:G.231
GOL.30: 1 residues within 4Å:- Chain C: A.185
No protein-ligand interaction detected (PLIP)GOL.37: 3 residues within 4Å:- Chain D: W.90, E.117, F.118
4 PLIP interactions:4 interactions with chain D- Hydrogen bonds: D:E.117, D:E.117
- Water bridges: D:W.90, D:F.118
- 6 x CL: CHLORIDE ION(Non-functional Binders)
CL.11: 3 residues within 4Å:- Chain A: E.41, A.46, P.47
Ligand excluded by PLIPCL.19: 1 residues within 4Å:- Chain B: R.289
Ligand excluded by PLIPCL.20: 4 residues within 4Å:- Chain B: H.150, A.197, P.198, R.199
Ligand excluded by PLIPCL.31: 3 residues within 4Å:- Chain C: E.41, A.46, P.47
Ligand excluded by PLIPCL.39: 1 residues within 4Å:- Chain D: R.289
Ligand excluded by PLIPCL.40: 4 residues within 4Å:- Chain D: H.150, A.197, P.198, R.199
Ligand excluded by PLIP- 2 x FMT: FORMIC ACID(Non-functional Binders)
FMT.18: 5 residues within 4Å:- Chain A: L.2, K.3
- Chain B: K.3, L.4, Q.5
4 PLIP interactions:2 interactions with chain B, 2 interactions with chain A- Hydrogen bonds: B:L.4, B:Q.5, A:K.3
- Water bridges: A:L.4
FMT.38: 5 residues within 4Å:- Chain C: L.2, K.3
- Chain D: K.3, L.4, Q.5
4 PLIP interactions:2 interactions with chain C, 2 interactions with chain D- Hydrogen bonds: C:K.3, D:L.4, D:Q.5
- Water bridges: C:L.4
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Monferrer, D. et al., Structural studies on the full-length LysR-type regulator TsaR from Comamonas testosteroni T-2 reveal a novel open conformation of the tetrameric LTTR fold. Mol.Microbiol. (2010)
- Release Date
- 2010-01-26
- Peptides
- LysR type regulator of tsaMBCD: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.95 Å
- Oligo State
- homo-tetramer
- Ligands
- 22 x TSU: PARA-TOLUENE SULFONATE(Non-covalent)
- 2 x IMD: IMIDAZOLE(Non-covalent)
- 8 x GOL: GLYCEROL(Non-functional Binders)
- 6 x CL: CHLORIDE ION(Non-functional Binders)
- 2 x FMT: FORMIC ACID(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Monferrer, D. et al., Structural studies on the full-length LysR-type regulator TsaR from Comamonas testosteroni T-2 reveal a novel open conformation of the tetrameric LTTR fold. Mol.Microbiol. (2010)
- Release Date
- 2010-01-26
- Peptides
- LysR type regulator of tsaMBCD: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B