SMTL ID : 3fyb.1

Crystal structure of a protein of unknown function (DUF1244) from Alcanivorax borkumensis

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

3 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 4 residues within 4Å: Chain A: Q.32, N.33, W.79, Q.84 Ligand excluded by PLIP CL.2: 4 residues within 4Å: Chain A: N.33, N.45, F.76, Q.84 Ligand excluded by PLIP CL.6: 4 residues within 4Å: Chain B: Q.32, N.33, W.79, Q.84 Ligand excluded by PLIP

2 x CA: CALCIUM ION(Non-covalent)

CA.3: 1 residues within 4Å: Chain A: V.71 No protein-ligand interaction detected (PLIP) CA.7: 1 residues within 4Å: Chain B: G.73 No protein-ligand interaction detected (PLIP)

2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.4: 4 residues within 4Å: Chain A: A.16, R.19, R.23 Chain B: E.57 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:E.57, A:R.19 PEG.8: 2 residues within 4Å: Chain B: T.56, E.61 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:T.56

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.5: 5 residues within 4Å: Chain A: G.66, E.69, Y.70 Chain B: G.1, M.2 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:G.66 Water bridges: B:A.3, B:A.3

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Singer, A.U. et al., Crystal structure of a protein of unknown function (DUF1244) from Alcanivorax borkumensis. To be Published

Release Date

2009-02-03

Peptides

Protein of unknown function (DUF1244): AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Protein of unknown function (DUF1244)