SMTL ID : 3fz2.3 (2 other biounits)

Crystal structure of the tail terminator protein from phage lambda (gpU-D74A)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-12-mer

Ligands

13 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 1 residues within 4Å: Chain A: T.25 No protein-ligand interaction detected (PLIP) SO4.2: 1 residues within 4Å: Chain A: R.113 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.113 SO4.3: 1 residues within 4Å: Chain B: R.113 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:R.113 SO4.4: 1 residues within 4Å: Chain C: R.113 2 PLIP interactions: 2 interactions with chain C Water bridges: C:R.113 Salt bridges: C:R.113 SO4.5: 1 residues within 4Å: Chain D: R.113 1 PLIP interactions: 1 interactions with chain D Salt bridges: D:R.113 SO4.6: 2 residues within 4Å: Chain E: R.30, R.113 2 PLIP interactions: 2 interactions with chain E Hydrogen bonds: E:R.30 Salt bridges: E:R.113 SO4.7: 1 residues within 4Å: Chain F: R.113 1 PLIP interactions: 1 interactions with chain F Salt bridges: F:R.113 SO4.8: 1 residues within 4Å: Chain G: R.113 1 PLIP interactions: 1 interactions with chain G Salt bridges: G:R.113 SO4.9: 1 residues within 4Å: Chain H: R.113 1 PLIP interactions: 1 interactions with chain H Salt bridges: H:R.113 SO4.10: 1 residues within 4Å: Chain I: R.113 1 PLIP interactions: 1 interactions with chain I Salt bridges: I:R.113 SO4.11: 1 residues within 4Å: Chain J: R.113 1 PLIP interactions: 1 interactions with chain J Salt bridges: J:R.113 SO4.12: 1 residues within 4Å: Chain K: R.113 1 PLIP interactions: 1 interactions with chain K Salt bridges: K:R.113 SO4.13: 1 residues within 4Å: Chain L: R.113 1 PLIP interactions: 1 interactions with chain L Salt bridges: L:R.113

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pell, L.G. et al., The X-ray crystal structure of the phage lambda tail terminator protein reveals the biologically relevant hexameric ring structure and demonstrates a conserved mechanism of tail termination among diverse long-tailed phages. J.Mol.Biol. (2009)

Release Date

2009-05-26

Peptides

Minor tail protein U: ABCDEFGHIJKL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

I
I

J
J

K
K

L
L

Minor tail protein U

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