- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.30 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CA: CALCIUM ION(Non-covalent)
- 4 x ACT: ACETATE ION(Non-functional Binders)
ACT.2: 6 residues within 4Å:- Chain A: D.84, A.85, R.86, E.106, W.108, P.109
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:E.106
- Water bridges: A:W.108
- Salt bridges: A:R.86
ACT.3: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)ACT.9: 6 residues within 4Å:- Chain B: D.84, A.85, R.86, E.106, W.108, P.109
3 PLIP interactions:3 interactions with chain B- Hydrophobic interactions: B:E.106
- Water bridges: B:W.108
- Salt bridges: B:R.86
ACT.10: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)- 8 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
MPD.4: 8 residues within 4Å:- Chain A: Y.37, L.41, Q.59, A.64, L.71, D.118, F.120, H.130
7 PLIP interactions:7 interactions with chain A- Hydrophobic interactions: A:Y.37, A:L.41, A:L.71, A:F.120
- Hydrogen bonds: A:Q.59, A:Q.59
- Water bridges: A:D.132
MPD.5: 9 residues within 4Å:- Chain A: L.41, F.74, L.75, V.78, P.83, A.85, Q.87, V.105
- Ligands: MPD.7
7 PLIP interactions:7 interactions with chain A- Hydrophobic interactions: A:F.74, A:L.75, A:V.78, A:P.83, A:A.85, A:Q.87, A:V.105
MPD.6: 5 residues within 4Å:- Chain A: L.63, R.107, I.134, D.136
- Chain B: Q.135
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:L.63
- Hydrogen bonds: A:R.107, A:D.136
- Water bridges: A:I.134, A:I.134, A:D.136
MPD.7: 3 residues within 4Å:- Chain A: A.64, L.114
- Ligands: MPD.5
1 PLIP interactions:1 interactions with chain A- Hydrophobic interactions: A:A.64
MPD.11: 8 residues within 4Å:- Chain B: Y.37, L.41, Q.59, A.64, L.71, D.118, F.120, H.130
6 PLIP interactions:6 interactions with chain B- Hydrophobic interactions: B:Y.37, B:L.41, B:L.71, B:F.120
- Hydrogen bonds: B:Q.59, B:Q.59
MPD.12: 9 residues within 4Å:- Chain B: L.41, F.74, L.75, V.78, P.83, A.85, Q.87, V.105
- Ligands: MPD.14
7 PLIP interactions:7 interactions with chain B- Hydrophobic interactions: B:F.74, B:L.75, B:V.78, B:P.83, B:A.85, B:Q.87, B:V.105
MPD.13: 5 residues within 4Å:- Chain A: Q.135
- Chain B: L.63, R.107, I.134, D.136
7 PLIP interactions:7 interactions with chain B- Hydrophobic interactions: B:L.63
- Hydrogen bonds: B:R.107, B:D.136
- Water bridges: B:I.134, B:I.134, B:D.136, B:D.136
MPD.14: 3 residues within 4Å:- Chain B: A.64, L.114
- Ligands: MPD.12
1 PLIP interactions:1 interactions with chain B- Hydrophobic interactions: B:A.64
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Joint Center for Structural Genomics (JCSG), Crystal structure of protein of unknown function with a cystatin-like fold (YP_498150.1) from Novosphingobium aromaticivorans DSM 12444 at 1.30 A resolution. To be published
- Release Date
- 2009-02-10
- Peptides
- Putative membrane protein: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.30 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CA: CALCIUM ION(Non-covalent)
- 4 x ACT: ACETATE ION(Non-functional Binders)
- 8 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Joint Center for Structural Genomics (JCSG), Crystal structure of protein of unknown function with a cystatin-like fold (YP_498150.1) from Novosphingobium aromaticivorans DSM 12444 at 1.30 A resolution. To be published
- Release Date
- 2009-02-10
- Peptides
- Putative membrane protein: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A