- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.75 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NA: SODIUM ION(Non-functional Binders)
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 19 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.3: 4 residues within 4Å:- Chain A: W.317, A.320, A.321, K.324
Ligand excluded by PLIPEDO.4: 5 residues within 4Å:- Chain A: S.76, I.77
- Chain B: P.54, L.56, P.57
Ligand excluded by PLIPEDO.5: 5 residues within 4Å:- Chain A: D.250, N.251, K.277, L.278, R.281
Ligand excluded by PLIPEDO.6: 3 residues within 4Å:- Chain A: F.163, D.361
- Ligands: EDO.12
Ligand excluded by PLIPEDO.7: 8 residues within 4Å:- Chain A: N.126, H.129, R.132, E.133, Y.134, G.135, Q.155, C.184
Ligand excluded by PLIPEDO.8: 5 residues within 4Å:- Chain A: G.55, L.56, Y.340, K.343, S.416
Ligand excluded by PLIPEDO.9: 6 residues within 4Å:- Chain A: P.54, G.55, L.56, P.57
- Chain B: S.76, I.77
Ligand excluded by PLIPEDO.10: 2 residues within 4Å:- Chain A: N.247, Y.248
Ligand excluded by PLIPEDO.11: 3 residues within 4Å:- Chain A: P.236, D.328, G.329
Ligand excluded by PLIPEDO.12: 6 residues within 4Å:- Chain A: F.163, Q.197, Y.360, D.361, K.362
- Ligands: EDO.6
Ligand excluded by PLIPEDO.17: 5 residues within 4Å:- Chain B: D.250, N.251, K.277, L.278, R.281
Ligand excluded by PLIPEDO.18: 5 residues within 4Å:- Chain B: S.234, H.235, P.236, G.329, N.332
Ligand excluded by PLIPEDO.19: 5 residues within 4Å:- Chain B: I.28, E.50, M.51, G.52, R.412
Ligand excluded by PLIPEDO.20: 7 residues within 4Å:- Chain B: N.126, R.132, E.133, Y.134, G.135, Q.155, C.184
Ligand excluded by PLIPEDO.21: 4 residues within 4Å:- Chain B: W.317, A.320, A.321, K.324
Ligand excluded by PLIPEDO.22: 2 residues within 4Å:- Chain B: N.247, Y.248
Ligand excluded by PLIPEDO.23: 5 residues within 4Å:- Chain B: F.163, Q.197, Y.360, D.361, K.362
Ligand excluded by PLIPEDO.24: 2 residues within 4Å:- Chain A: G.291
- Chain B: R.151
Ligand excluded by PLIPEDO.25: 4 residues within 4Å:- Chain B: Y.134, Y.177, T.180, F.183
Ligand excluded by PLIP- 2 x PE4: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL(Non-functional Binders)
PE4.15: 4 residues within 4Å:- Chain B: Q.60, I.61, E.64, T.65
1 PLIP interactions:1 interactions with chain B- Water bridges: B:E.64
PE4.16: 6 residues within 4Å:- Chain B: S.92, D.102, I.103, P.104, G.276, K.277
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:K.277
- Water bridges: B:S.92, B:I.103, B:A.105, B:G.276, B:G.276
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Fleischman, N.M. et al., Molecular characterization of novel pyridoxal-5'-phosphate-dependent enzymes from the human microbiome. Protein Sci. (2014)
- Release Date
- 2009-02-10
- Peptides
- Putative aminotransferase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.75 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NA: SODIUM ION(Non-functional Binders)
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 19 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 2 x PE4: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Fleischman, N.M. et al., Molecular characterization of novel pyridoxal-5'-phosphate-dependent enzymes from the human microbiome. Protein Sci. (2014)
- Release Date
- 2009-02-10
- Peptides
- Putative aminotransferase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B