SMTL ID : 3g1r.2 (1 other biounit)

Crystal structure of human liver 5beta-reductase (AKR1D1) in complex with NADP and Finasteride. Resolution 1.70 A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.1: 28 residues within 4Å: Chain A: G.44, T.45, Y.46, D.73, Y.78, K.107, S.189, N.190, Q.213, Y.239, S.240, P.241, L.242, G.243, T.244, S.245, L.259, A.276, I.291, P.292, K.293, S.294, F.295, N.296, R.299, E.302, N.303 Ligands: FIT.2 23 PLIP interactions: 23 interactions with chain A Hydrophobic interactions: A:Y.239 Hydrogen bonds: A:T.45, A:Y.46, A:D.73, A:S.189, A:N.190, A:Q.213, A:S.240, A:L.242, A:T.244, A:K.293, A:F.295, A:E.302, A:N.303 Water bridges: A:S.245, A:K.293, A:K.293, A:K.293, A:R.299 Salt bridges: A:K.293, A:R.299 pi-Stacking: A:Y.239 pi-Cation interactions: A:R.299

1 x FIT: (4aR,4bS,6aS,7S,9aS,9bS,11aR)-N-tert-butyl-4a,6a-dimethyl-2-oxo-2,4a,4b,5,6,6a,7,8,9,9a,9b,10,11,11a-tetradecahydro-1H-indeno[5,4-f]quinoline-7-carboxamide(Non-covalent)

FIT.2: 12 residues within 4Å: Chain A: Y.46, I.77, Y.78, W.109, E.140, Y.152, R.154, W.160, W.250, M.333, W.334 Ligands: NAP.1 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:Y.46, A:I.77, A:W.109, A:Y.152, A:Y.152, A:W.250, A:W.250, A:W.334 Hydrogen bonds: A:Y.78, A:Y.78

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Drury, J.E. et al., Inhibition of human steroid 5beta-reductase (AKR1D1) by finasteride and structure of the enzyme-inhibitor complex. J.Biol.Chem. (2009)

Release Date

2009-06-09

Peptides

3-oxo-5-beta-steroid 4-dehydrogenase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

3-oxo-5-beta-steroid 4-dehydrogenase

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