SMTL ID : 3g21.1

Crystal structure of the C-terminal domain of the Rous Sarcoma Virus capsid protein: Low pH

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 0.90 Å

Oligo State

homo-dimer

Ligands

2 x NO3: NITRATE ION(Non-functional Binders)

NO3.1: 3 residues within 4Å: Chain A: G.67, E.68, K.71 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.71 Water bridges: A:T.65, A:E.68 NO3.2: 3 residues within 4Å: Chain B: G.67, E.68, K.71 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:K.71 Water bridges: B:T.65, B:E.68

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bailey, G.D. et al., Proton-linked dimerization of a retroviral capsid protein initiates capsid assembly. Structure (2009)

Release Date

2009-06-02

Peptides

Gag polyprotein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Gag polyprotein

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