SMTL ID : 3g62.1

Subatomic resolution structure of PfluDING at pH 4.5

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 0.98 Å

Oligo State

monomer

Ligands

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 13 residues within 4Å: Chain A: A.8, T.9, L.10, P.11, G.32, S.33, D.63, R.142, S.146, G.147, T.148, T.149, S.191 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:T.9, A:T.9, A:L.10, A:S.33, A:S.33, A:S.33, A:D.63, A:S.146, A:G.147, A:T.148, A:T.148, A:T.148 Salt bridges: A:R.142

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 6 residues within 4Å: Chain A: K.65, L.66, S.67, A.68, L.71, D.266 4 PLIP interactions: 4 interactions with chain A Water bridges: A:A.68, A:A.68, A:A.68, A:D.266 EDO.3: 4 residues within 4Å: Chain A: S.248, T.330, V.335, P.336 2 PLIP interactions: 2 interactions with chain A Water bridges: A:S.248, A:S.248 EDO.4: 2 residues within 4Å: Chain A: S.67, A.68 3 PLIP interactions: 3 interactions with chain A Water bridges: A:S.67, A:S.67, A:A.68 EDO.6: 1 residues within 4Å: Chain A: T.175 No protein-ligand interaction detected (PLIP)

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.5: 2 residues within 4Å: Chain A: V.111, K.159 3 PLIP interactions: 3 interactions with chain A Water bridges: A:K.159, A:K.159 Salt bridges: A:K.159

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liebschner, D. et al., Elucidation of the phosphate binding mode of DING proteins revealed by subangstrom X-ray crystallography. J.Am.Chem.Soc. (2009)

Release Date

2009-10-06

Peptides

PfluDING: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PfluDING

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