SMTL ID : 3g9i.1 (1 other biounit)

GR DNA Binding domain: Pal complex-35

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

homo-tetramer

Ligands

8 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.5, C.8, C.22, C.25 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.5, A:C.8, A:C.22, A:C.25 ZN.2: 4 residues within 4Å: Chain A: C.41, C.47, C.57, C.60 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.41, A:C.47, A:C.57, A:C.60 ZN.5: 4 residues within 4Å: Chain B: C.5, C.8, C.22, C.25 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.5, B:C.8, B:C.22, B:C.25 ZN.6: 4 residues within 4Å: Chain B: C.41, C.47, C.57, C.60 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.41, B:C.47, B:C.57, B:C.60 ZN.8: 4 residues within 4Å: Chain E: C.5, C.8, C.22, C.25 4 PLIP interactions: 4 interactions with chain E Metal complexes: E:C.5, E:C.8, E:C.22, E:C.25 ZN.9: 4 residues within 4Å: Chain E: C.41, C.47, C.57, C.60 4 PLIP interactions: 4 interactions with chain E Metal complexes: E:C.41, E:C.47, E:C.57, E:C.60 ZN.12: 4 residues within 4Å: Chain F: C.5, C.8, C.22, C.25 4 PLIP interactions: 4 interactions with chain F Metal complexes: F:C.5, F:C.8, F:C.22, F:C.25 ZN.13: 4 residues within 4Å: Chain F: C.41, C.47, C.57, C.60 4 PLIP interactions: 4 interactions with chain F Metal complexes: F:C.41, F:C.47, F:C.57, F:C.60

6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 4 residues within 4Å: Chain A: N.45, A.59, Y.62, R.63 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.45, A:R.63 Water bridges: A:N.45 EDO.4: 3 residues within 4Å: Chain A: R.44 Chain B: R.44, D.46 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:D.46 EDO.7: 3 residues within 4Å: Chain B: E.34, G.35, Q.36 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:E.34 EDO.10: 4 residues within 4Å: Chain E: N.45, A.59, Y.62, R.63 3 PLIP interactions: 3 interactions with chain E Hydrogen bonds: E:N.45, E:R.63 Water bridges: E:N.45 EDO.11: 3 residues within 4Å: Chain E: R.44 Chain F: R.44, D.46 1 PLIP interactions: 1 interactions with chain F Hydrogen bonds: F:D.46 EDO.14: 3 residues within 4Å: Chain F: E.34, G.35, Q.36 1 PLIP interactions: 1 interactions with chain F Hydrogen bonds: F:E.34

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Meijsing, S.H. et al., DNA binding site sequence directs glucocorticoid receptor structure and activity. Science (2009)

Release Date

2009-04-21

Peptides

Glucocorticoid receptor: ABEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

E
A

F
B

Glucocorticoid receptor

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