SMTL ID : 3g9y.1

Crystal structure of the second zinc finger from ZRANB2/ZNF265 bound to 6 nt ssRNA sequence AGGUAA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

1 x A- G- G- U- A- A: RNA (5'-R(*AP*GP*GP*UP*AP*A)-3')(Non-covalent)

A-G-G-U-A-A.1: 9 residues within 4Å: Chain A: D.6, N.14, V.15, N.16, W.17, R.19, R.20, N.24, M.25 Protein-ligand interaction information (PLIP) not available

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: C.9, C.12, C.23, C.26 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.9, A:C.12, A:C.23, A:C.26

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Loughlin, F.E. et al., The zinc fingers of the SR-like protein ZRANB2 are single-stranded RNA-binding domains that recognize 5' splice site-like sequences. Proc.Natl.Acad.Sci.USA (2009)

Release Date

2009-03-03

Peptides

Zinc finger Ran-binding domain-containing protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Zinc finger Ran-binding domain-containing protein 2

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