SMTL ID : 3gcp.1

Human P38 MAP Kinase in Complex with SB203580

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

monomer

Ligands

1 x SB2: 4-[5-(4-FLUORO-PHENYL)-2-(4-METHANESULFINYL-PHENYL)-3H-IMIDAZOL-4-YL]-PYRIDINE(Non-covalent)

SB2.1: 15 residues within 4Å: Chain A: Y.35, V.38, A.51, K.53, I.84, L.86, L.104, V.105, T.106, H.107, L.108, M.109, F.169, G.170, L.171 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:V.38, A:A.51, A:K.53, A:I.84, A:F.169, A:F.169, A:F.169, A:L.171 Hydrogen bonds: A:K.53, A:M.109 Water bridges: A:G.170 pi-Stacking: A:Y.35, A:F.169

2 x BOG: octyl beta-D-glucopyranoside(Non-covalent)

BOG.2: 13 residues within 4Å: Chain A: E.192, L.195, W.197, H.199, Y.200, L.232, L.236, L.246, K.249, L.291, D.292, S.293, D.294 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:L.195, A:W.197, A:L.232, A:L.236, A:L.246, A:L.291, A:L.291 Hydrogen bonds: A:H.199, A:K.249, A:D.292, A:S.293, A:S.293, A:D.294 Water bridges: A:N.201, A:N.201 BOG.3: 10 residues within 4Å: Chain A: R.70, L.74, V.83, I.84, I.141, I.146, I.147, H.148, R.149, D.168 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.74, A:V.83, A:I.84, A:I.141, A:D.168 Hydrogen bonds: A:I.147, A:R.149, A:R.149 Water bridges: A:R.70, A:R.70, A:R.70 Salt bridges: A:R.70

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Simard, J.R. et al., Development of a fluorescent-tagged kinase assay system for the detection and characterization of allosteric kinase inhibitors. J.Am.Chem.Soc. (2009)

Release Date

2009-06-09

Peptides

Mitogen-activated protein kinase 14: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 14

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