SMTL ID : 3gdq.1

Crystal structure of the human 70kDa heat shock protein 1-like ATPase domain in complex with ADP and inorganic phosphate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 8 residues within 4Å: Chain A: G.36, T.37, K.95, P.171, E.199, T.228 Ligands: ADP.2, MN.4 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:T.37, A:T.37, A:E.199, A:T.228 Water bridges: A:K.95, A:K.95, A:D.223, A:G.226, A:T.228, A:T.228 Salt bridges: A:K.95

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.2: 19 residues within 4Å: Chain A: G.36, T.37, T.38, Y.39, G.225, G.226, G.254, E.292, K.295, R.296, S.299, G.362, G.363, S.364, R.366, I.367, D.390 Ligands: PO4.1, MN.4 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:T.38, A:T.38, A:Y.39, A:G.226, A:E.292, A:K.295, A:R.296, A:S.299, A:S.299, A:G.363 Water bridges: A:Y.39, A:K.95, A:G.227, A:T.228, A:D.390, A:D.390

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 9 residues within 4Å: Chain A: T.37, K.95, R.96, R.100, Y.173, F.174, Q.178, T.228, T.250 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:T.37, A:R.100, A:Q.178 Water bridges: A:K.95, A:R.96, A:R.96, A:T.250, A:H.251, A:H.251

1 x MN: MANGANESE (II) ION(Non-functional Binders)

MN.4: 2 residues within 4Å: Ligands: PO4.1, ADP.2 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wisniewska, M. et al., Crystal structures of the ATPase domains of four human Hsp70 isoforms: HSPA1L/Hsp70-hom, HSPA2/Hsp70-2, HSPA6/Hsp70B', and HSPA5/BiP/GRP78. Plos One (2010)

Release Date

2009-04-14

Peptides

Heat shock 70 kDa protein 1-like: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Heat shock 70 kDa protein 1-like