SMTL ID : 3gp0.1

Crystal Structure of Human Mitogen Activated Protein Kinase 11 (p38 beta) in complex with Nilotinib

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x NIL: Nilotinib(Non-covalent)

NIL.1: 21 residues within 4Å: Chain A: V.36, A.49, V.50, K.51, R.65, E.69, L.72, L.73, V.81, I.82, L.102, T.104, L.106, M.107, A.109, H.146, A.155, I.164, L.165, D.166, F.167 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:A.49, A:K.51, A:R.65, A:E.69, A:L.73, A:L.73, A:L.102, A:T.104, A:L.165, A:D.166 Hydrogen bonds: A:E.69, A:T.104, A:T.104, A:M.107, A:D.166 pi-Stacking: A:F.167

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: R.71, H.75, P.320, Y.321, D.322 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.71, A:P.320, A:D.322 Water bridges: A:R.71, A:H.75, A:D.322

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 3 residues within 4Å: Chain A: R.21, R.43, D.86 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Filippakopoulos, P. et al., Crystal Structure of Human Mitogen Activated Protein Kinase 11 (p38 beta) in complex with Nilotinib. To be Published

Release Date

2009-04-07

Peptides

Mitogen-activated protein kinase 11: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 11