SMTL ID : 3gqo.2 (3 other biounits)

Crystal structure of macro domain of Venezuelan Equine Encephalitis virus in complex with ADP-ribose

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x APR: ADENOSINE-5-DIPHOSPHORIBOSE(Non-covalent)

APR.1: 22 residues within 4Å: Chain A: G.11, D.12, I.13, A.24, A.25, N.26, Q.30, G.32, G.33, G.34, V.35, C.36, A.38, L.110, L.111, S.112, T.113, G.114, I.115, F.116, R.146, W.150 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:D.12, A:I.13, A:N.26, A:G.33, A:V.35, A:S.112, A:T.113, A:T.113, A:T.113, A:G.114, A:I.115, A:F.116 Water bridges: A:N.23, A:C.36, A:C.36, A:R.146

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Malet, H. et al., The crystal structures of Chikungunya and Venezuelan equine encephalitis virus nsP3 macro domains define a conserved adenosine binding pocket. J.Virol. (2009)

Release Date

2009-07-21

Peptides

Non-structural protein 3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Non-structural protein 3

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