SMTL ID : 3gqu.1

Pyrococcus Horikoshii NOP5 RNA Binding Domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

12 x IOD: IODIDE ION(Non-functional Binders)

IOD.1: 1 residues within 4Å: Ligands: IOD.2 Ligand excluded by PLIP IOD.2: 3 residues within 4Å: Chain A: L.45, Q.94 Ligands: IOD.1 Ligand excluded by PLIP IOD.3: 2 residues within 4Å: Chain A: E.23 Ligands: IOD.4 Ligand excluded by PLIP IOD.4: 2 residues within 4Å: Chain A: E.23 Ligands: IOD.3 Ligand excluded by PLIP IOD.5: 2 residues within 4Å: Chain A: P.96, N.99 Ligand excluded by PLIP IOD.6: 3 residues within 4Å: Chain A: V.33, L.56 Ligands: IOD.7 Ligand excluded by PLIP IOD.7: 3 residues within 4Å: Chain A: L.56, K.57 Ligands: IOD.6 Ligand excluded by PLIP IOD.8: 1 residues within 4Å: Chain A: A.112 Ligand excluded by PLIP IOD.9: 2 residues within 4Å: Chain A: K.116, A.141 Ligand excluded by PLIP IOD.10: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP IOD.11: 2 residues within 4Å: Chain A: A.97, R.100 Ligand excluded by PLIP IOD.12: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hardin, J.W. et al., Analysis of a Critical Interaction within the Archaeal Box C/D Small Ribonucleoprotein Complex. J.Biol.Chem. (2009)

Release Date

2009-04-21

Peptides

NOP5P PROTEIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

NOP5P PROTEIN

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