SMTL ID : 3gra.1

Crystal structure of AraC family transcriptional regulator from Pseudomonas putida

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 7 residues within 4Å: Chain A: L.12, L.13, S.45, L.46, D.47, V.51, Y.87 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.46, A:D.47 EDO.2: 3 residues within 4Å: Chain A: P.88, E.89, R.92 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.92 Water bridges: A:P.88, A:E.89

1 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 1 residues within 4Å: Chain A: D.91 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:D.91, H2O.2, H2O.2, H2O.2, H2O.3

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 3 residues within 4Å: Chain A: L.46, E.63, E.89 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.89

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bagaria, A. et al., Crystal structure of AraC family transcriptional regulator from Pseudomonas putida. To be Published

Release Date

2009-04-14

Peptides

Transcriptional regulator, AraC family: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Transcriptional regulator, AraC family