SMTL ID : 3gub.1

Crystal structure of DAPKL93G complexed with N6-(2-Phenylethyl)adenosine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.71 Å

Oligo State

monomer

Ligands

1 x GUB: 9-alpha-L-lyxofuranosyl-N-(2-phenylethyl)-9H-purin-6-amine(Non-covalent)

GUB.1: 18 residues within 4Å: Chain A: L.19, G.20, S.21, V.27, A.40, K.42, L.68, I.77, T.78, L.79, L.91, G.93, E.94, V.96, E.100, E.143, M.146, I.160 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:A.40, A:K.42, A:L.68, A:I.77, A:I.77, A:L.79, A:L.91 Hydrogen bonds: A:E.94, A:V.96, A:E.100, A:E.100 Water bridges: A:E.100, A:D.161

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: F.236, K.249, R.253 4 PLIP interactions: 4 interactions with chain A Water bridges: A:F.236, A:K.249 Salt bridges: A:K.249, A:R.253

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

McNamara, L.K. et al., Crystal structures of the DAPK gatekeeper mutant complexed with N6-modified adenosine analogs. To be Published

Release Date

2010-03-09

Peptides

Death-associated protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Death-associated protein kinase 1

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