SMTL ID : 3gvo.1

Structure and RNA binding of the mouse Pumilio-2 Puf Domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain A: R.39, Q.42, Y.75 Ligands: GOL.3 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.39, A:Q.42 Water bridges: A:R.39 GOL.2: 3 residues within 4Å: Chain A: F.16, L.19, D.23 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.18 Water bridges: A:D.23, A:D.23 GOL.3: 5 residues within 4Å: Chain A: Q.42, Y.75, Q.78, K.79 Ligands: GOL.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.78, A:K.79 GOL.4: 3 residues within 4Å: Chain A: G.242, E.275, Q.279 3 PLIP interactions: 3 interactions with chain A Water bridges: A:E.275, A:E.275, A:E.275

1 x DTD: DITHIANE DIOL(Non-covalent)

DTD.5: 2 residues within 4Å: Chain A: S.121, Q.124 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.121, A:S.121

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jenkins, H.T. et al., Structure and RNA binding of the mouse Pumilio-2 Puf domain. J.Struct.Biol. (2009)

Release Date

2009-06-30

Peptides

Pumilio homolog 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Pumilio homolog 2

Related Entries With Identical Sequence