SMTL ID : 3gy0.1

Crystal structure of putatitve short chain dehydrogenase FROM SHIGELLA FLEXNERI 2A STR. 301 complexed with NADP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

homo-dimer

Ligands

2 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.1: 26 residues within 4Å: Chain A: G.17, S.19, D.20, G.21, I.22, R.42, N.43, L.67, D.68, L.69, L.70, N.97, A.98, G.99, I.121, T.148, S.149, Y.163, K.167, P.192, G.193, G.194, T.195, T.197, M.199, R.200 32 PLIP interactions: 32 interactions with chain A Hydrophobic interactions: A:P.192 Hydrogen bonds: A:G.17, A:S.19, A:S.19, A:S.19, A:D.20, A:I.22, A:R.42, A:N.43, A:D.68, A:L.69, A:L.70, A:N.97, A:G.99, A:Y.163, A:K.167, A:T.195, A:T.195, A:T.197, A:T.197, A:M.199 Water bridges: A:D.20, A:D.20, A:D.20, A:G.23, A:R.42, A:R.42, A:N.97, A:A.198, A:R.200 Salt bridges: A:R.42, A:K.46 NAP.2: 26 residues within 4Å: Chain B: G.17, S.19, D.20, G.21, I.22, R.42, N.43, L.67, D.68, L.69, L.70, N.97, A.98, G.99, I.121, T.148, S.149, Y.163, K.167, P.192, G.193, G.194, T.195, T.197, M.199, R.200 28 PLIP interactions: 28 interactions with chain B Hydrophobic interactions: B:P.192 Hydrogen bonds: B:G.17, B:S.19, B:S.19, B:S.19, B:D.20, B:I.22, B:R.42, B:N.43, B:D.68, B:D.68, B:L.69, B:L.70, B:N.97, B:G.99, B:K.167, B:T.195, B:T.195, B:T.197, B:M.199 Water bridges: B:G.23, B:R.42, B:R.42, B:N.97, B:A.198, B:R.200 Salt bridges: B:R.42, B:K.46

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Malashkevich, V.N. et al., Crystal structure of putatitve short chain dehydrogenase FROM SHIGELLA FLEXNERI 2A STR. 301 complexed with NADP. To be Published

Release Date

2009-04-14

Peptides

dehydrogenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

dehydrogenase

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