SMTL ID : 3gyt.1

Nuclear receptor DAF-12 from parasitic nematode Strongyloides stercoralis in complex with its physiological ligand dafachronic acid delta 4

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-1-1-mer

Ligands

1 x DL4: (14beta,17alpha,25R)-3-oxocholest-4-en-26-oic acid(Non-covalent)

DL4.1: 20 residues within 4Å: Chain A: L.36, I.46, V.49, M.50, I.52, T.53, L.87, T.88, R.90, G.91, V.94, T.104, V.106, I.112, M.116, F.117, Q.128, V.215, A.219, L.222 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:L.36, A:I.46, A:V.49, A:I.52, A:R.90, A:V.94, A:T.104, A:I.112, A:F.117, A:L.222 Hydrogen bonds: A:T.104, A:Q.128 Water bridges: A:R.90, A:R.90 Salt bridges: A:R.90

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, Z. et al., Identification of the nuclear receptor DAF-12 as a therapeutic target in parasitic nematodes. Proc.Natl.Acad.Sci.USA (2009)

Release Date

2009-07-07

Peptides

Nuclear hormone receptor of the steroid/thyroid hormone receptors superfamily: A
SRC1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Nuclear hormone receptor of the steroid/thyroid hormone receptors superfamily

SRC1

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