SMTL ID : 3gyx.4 (5 other biounits)

Crystal structure of adenylylsulfate reductase from Desulfovibrio gigas

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

hetero-1-1-mer

Ligands

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 34 residues within 4Å: Chain A: G.29, G.30, G.31, M.32, G.33, D.58, K.59, A.60, S.65, G.66, A.67, V.68, L.72, A.74, I.75, N.76, I.189, F.190, I.191, A.228, C.229, G.230, W.249, Y.250, P.251, S.257, M.383, S.415, H.416, A.459, D.460, F.469, S.470, S.473 26 PLIP interactions: 26 interactions with chain A Hydrophobic interactions: A:A.67, A:L.72, A:W.249, A:Y.250, A:Y.250 Hydrogen bonds: A:G.30, A:G.30, A:M.32, A:G.33, A:K.59, A:A.60, A:A.67, A:N.76, A:N.76, A:N.76, A:I.191, A:G.230, A:S.257, A:S.257, A:S.415, A:D.460, A:D.460, A:S.470, A:S.473 pi-Stacking: A:H.416 pi-Cation interactions: A:K.59

2 x SF4: IRON/SULFUR CLUSTER(Non-covalent)

SF4.2: 13 residues within 4Å: Chain A: W.253 Chain B: T.2, C.24, P.25, L.28, N.40, C.46, W.47, E.48, C.49, Y.50, S.51, C.52 4 PLIP interactions: 4 interactions with chain B, Metal complexes: B:C.24, B:C.46, B:C.49, B:C.52 SF4.3: 14 residues within 4Å: Chain B: V.4, C.9, D.10, G.11, C.12, T.18, A.19, C.20, A.38, C.56, P.57, Q.58, A.60, I.61 5 PLIP interactions: 5 interactions with chain B, Salt bridges: B:D.10 Metal complexes: B:C.9, B:C.12, B:C.20, B:C.56

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chiang, Y.-L. et al., Crystal structure of Adenylylsulfate reductase from Desulfovibrio gigas suggests a potential self-regulation mechanism involving the C terminus of the beta-subunit. J.Bacteriol. (2009)

Release Date

2009-12-15

Peptides

Adenylylsulfate Reductase: A
Adenylylsulfate Reductase: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
G

B
H

Adenylylsulfate Reductase

Adenylylsulfate Reductase

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