SMTL ID : 3gz4.1

Crystal structure of putative short chain dehydrogenase FROM ESCHERICHIA COLI CFT073 complexed with NADPH

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NDP.1: 28 residues within 4Å: Chain A: G.21, S.23, D.24, G.25, I.26, R.46, N.47, K.50, L.71, D.72, L.73, L.74, N.101, A.102, G.103, V.125, T.152, S.153, S.154, Y.167, K.171, P.196, G.197, G.198, T.199, T.201, M.203, R.204 24 PLIP interactions: 24 interactions with chain A Hydrogen bonds: A:G.21, A:S.23, A:S.23, A:S.23, A:I.26, A:R.46, A:D.72, A:D.72, A:L.73, A:L.74, A:N.101, A:G.103, A:Y.167, A:K.171, A:T.199, A:T.199, A:T.201, A:T.201 Water bridges: A:G.27, A:R.46, A:N.101 Salt bridges: A:R.46, A:K.50 pi-Cation interactions: A:R.46 NDP.2: 27 residues within 4Å: Chain B: G.21, S.23, D.24, G.25, I.26, R.46, K.50, L.71, D.72, L.73, L.74, N.101, A.102, G.103, V.125, T.152, S.153, S.154, Y.167, K.171, P.196, G.197, G.198, T.199, T.201, M.203, R.204 24 PLIP interactions: 24 interactions with chain B Hydrophobic interactions: B:P.196 Hydrogen bonds: B:G.21, B:S.23, B:S.23, B:D.24, B:I.26, B:R.46, B:D.72, B:D.72, B:L.73, B:L.74, B:N.101, B:G.103, B:Y.167, B:K.171, B:T.199, B:T.199, B:T.199, B:T.201 Water bridges: B:R.46, B:R.46 Salt bridges: B:R.46, B:K.50 pi-Cation interactions: B:R.46

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Malashkevich, V.N. et al., Crystal structure of putative short chain dehydrogenase FROM ESCHERICHIA COLI CFT073 complexed with NADPH. To be Published

Release Date

2009-04-14

Peptides

Hypothetical oxidoreductase yciK: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Hypothetical oxidoreductase yciK

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