SMTL ID : 3h2b.1

Crystal structure of the SAM-dependent methyltransferase cg3271 from Corynebacterium glutamicum in complex with S-adenosyl-L-homocysteine and pyrophosphate. Northeast Structural Genomics Consortium Target CgR113A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)

SAH.1: 17 residues within 4Å: Chain A: V.5, Y.9, L.20, G.49, G.51, R.54, W.55, E.70, P.71, A.72, L.75, T.92, I.93, W.109, Y.110, S.111, M.115 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.51, A:I.93, A:W.109 Water bridges: A:T.92, A:W.109 Salt bridges: A:R.54 SAH.3: 16 residues within 4Å: Chain B: T.2, V.5, Y.9, G.49, G.51, R.54, W.55, E.70, P.71, A.72, L.75, I.93, W.109, Y.110, S.111, M.115 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:T.2, B:I.93, B:W.109 Water bridges: B:S.50, B:W.109, B:H.114 Salt bridges: B:R.54

1 x PPV: PYROPHOSPHATE(Non-covalent)

PPV.2: 4 residues within 4Å: Chain A: R.80, F.88, H.89, H.90 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:H.90 Water bridges: A:R.80 Salt bridges: A:R.80, A:R.80, A:H.90

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Forouhar, F. et al., Northeast Structural Genomics Consortium Target CgR113A. To be published

Release Date

2009-04-28

Peptides

SAM-dependent methyltransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

SAM-dependent methyltransferase