SMTL ID : 3h4t.1

Chimeric Glycosyltransferase for the generation of novel natural products - GtfAH1 in complex with UDP-2F-Glc

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.15 Å

Oligo State

monomer

Ligands

4 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 4 residues within 4Å: Chain A: V.57, A.59, R.62, P.68 5 PLIP interactions: 5 interactions with chain A Water bridges: A:A.59, A:R.62, A:R.62, A:G.70 Salt bridges: A:R.62 PO4.2: 4 residues within 4Å: Chain A: R.109, D.170, T.174, D.175 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:D.170, A:D.175, A:D.175 Water bridges: A:R.109, A:R.109 Salt bridges: A:R.109 PO4.3: 2 residues within 4Å: Chain A: P.118, R.120 3 PLIP interactions: 3 interactions with chain A Water bridges: A:Y.119, A:Y.119 Salt bridges: A:R.120 PO4.4: 3 residues within 4Å: Chain A: R.55, E.66, L.67 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.65, A:L.67 Salt bridges: A:R.55

1 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)

UDP.5: 17 residues within 4Å: Chain A: S.10, R.11, G.12, E.15, R.207, G.229, S.230, G.274, E.275, V.276, H.278, H.291, G.293, A.294, G.295, T.296, A.299 23 PLIP interactions: 23 interactions with chain A Hydrogen bonds: A:R.11, A:G.12, A:R.207, A:S.230, A:S.230, A:S.230, A:V.276, A:V.276, A:H.278, A:G.295, A:G.295, A:T.296, A:T.296 Water bridges: A:D.205, A:D.205, A:Y.225, A:E.275, A:A.294, A:A.294, A:A.294 Salt bridges: A:H.291, A:H.291 pi-Stacking: A:H.278

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Truman, A.W. et al., Chimeric glycosyltransferases for the generation of hybrid glycopeptides. Chem.Biol. (2009)

Release Date

2009-07-28

Peptides

Glycosyltransferase GtfA, Glycosyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Glycosyltransferase GtfA, Glycosyltransferase

Related Entries With Identical Sequence