SMTL ID : 3h52.2 (1 other biounit)

Crystal structure of the antagonist form of human glucocorticoid receptor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-2-1-mer

Ligands

2 x 486: 11-(4-DIMETHYLAMINO-PHENYL)-17-HYDROXY-13-METHYL-17-PROP-1-YNYL-1,2,6,7,8,11,12,13,14,15,16,17-DODEC AHYDRO-CYCLOPENTA[A]PHENANTHREN-3-ONE(Non-covalent)

486.1: 23 residues within 4Å: Chain A: M.37, L.40, N.41, G.44, G.45, Q.47, V.48, W.77, M.78, M.81, L.85, R.88, F.100, M.116, Q.119, C.120, M.123, L.209, Y.212, C.213, M.229, L.230, I.233 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.40, A:W.77, A:L.85, A:F.100, A:Q.119, A:L.209, A:Y.212, A:L.230 Hydrogen bonds: A:Q.47, A:R.88 486.3: 17 residues within 4Å: Chain B: L.40, N.41, G.44, G.45, Q.47, V.48, W.77, M.78, M.81, L.85, R.88, F.100, M.116, M.123, C.213, F.217, P.239 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:L.40, B:W.77, B:F.100 Hydrogen bonds: B:Q.47, B:R.88

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 5 residues within 4Å: Chain A: H.122, Y.125, E.204, V.205, N.208 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:H.122, A:E.204, A:E.204, A:N.208

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schoch, G.A. et al., Molecular switch in the glucocorticoid receptor: active and passive antagonist conformations. J.Mol.Biol. (2010)

Release Date

2009-12-01

Peptides

Glucocorticoid receptor: AB
Nuclear receptor corepressor 1: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

C
M

Glucocorticoid receptor

Nuclear receptor corepressor 1

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