SMTL ID : 3h9o.1

Phosphoinositide-dependent protein kinase 1 (PDK-1) in complex with compound 9

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x 9BD: 2-(1H-imidazol-1-yl)-9-methoxy-8-(2-methoxyethoxy)benzo[c][2,7]naphthyridin-4-amine(Non-covalent)

9BD.1: 18 residues within 4Å: Chain A: L.40, V.48, A.61, K.63, V.95, L.111, S.112, Y.113, A.114, K.115, N.116, G.117, E.118, K.121, L.164, Q.172, T.174, D.175 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.40, A:A.61, A:Y.113, A:L.164 Hydrogen bonds: A:S.112, A:A.114, A:D.175 Water bridges: A:F.176

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, K.H. et al., Benzo[c][2,7]naphthyridines as inhibitors of PDK-1. Bioorg.Med.Chem.Lett. (2009)

Release Date

2009-08-25

Peptides

3-phosphoinositide-dependent protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

3-phosphoinositide-dependent protein kinase 1