SMTL ID : 3hbo.1 (2 other biounits)

Crystal structure of chemically synthesized [D-Ala51/51']HIV-1 protease

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.71 Å

Oligo State

monomer

Ligands

1 x 2NC: N-{(2S)-2-[(N-ACETYL-L-THREONYL-L-ISOLEUCYL)AMINO]HEXYL}-L-NORLEUCYL-L-GLUTAMINYL-N~5~-[AMINO(IMINIO)METHYL]-L-ORNITHINAMIDE(Non-covalent)

2NC.1: 14 residues within 4Å: Chain A: R.8, L.23, D.25, G.27, A.28, D.29, D.30, I.47, G.48, G.49, I.50, P.81, V.82, I.84 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:L.23, A:A.28, A:D.30, A:I.47, A:I.50, A:I.50, A:P.81, A:V.82 Hydrogen bonds: A:G.27, A:D.29, A:G.48, A:G.48 Water bridges: A:R.8, A:G.48, A:G.48, A:I.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Torbeev, V.Y. et al., Protein conformational dynamics in the mechanism of HIV-1 protease catalysis. Proc.Natl.Acad.Sci.USA (2011)

Release Date

2010-05-26

Peptides

[D-Ala51/51']HIV-1 protease: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

[D-Ala51/51']HIV-1 protease

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