SMTL ID : 3hc4.1

BHA10 IgG1 Fab quadruple mutant variant - antibody directed at human LTBR

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.62 Å

Oligo State

hetero-1-1-mer

Ligands

3 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 5 residues within 4Å: Chain A: Y.33, H.35, W.50, S.99 Chain B: Y.94 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:Y.33 Hydrogen bonds: A:S.99 Salt bridges: A:H.35 ACT.4: 3 residues within 4Å: Chain B: D.151, H.189 Ligands: ZN.3 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:H.189 ACT.5: 6 residues within 4Å: Chain A: G.161, H.163, T.182 Chain B: N.137, N.138 Ligands: ZN.2 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B Water bridges: A:T.182 Salt bridges: A:H.163 Hydrogen bonds: B:N.137, B:N.138

2 x ZN: ZINC ION(Non-covalent)

ZN.2: 5 residues within 4Å: Chain A: H.163 Chain B: N.137, N.138, S.174 Ligands: ACT.5 3 PLIP interactions: 1 interactions with chain A, 1 Ligand-Ligand interactions, 1 Ligand-Water interactions Metal complexes: A:H.163, ACT.5, H2O.6 ZN.3: 3 residues within 4Å: Chain B: D.151, H.189 Ligands: ACT.4 3 PLIP interactions: 2 interactions with chain B, 1 Ligand-Ligand interactions Metal complexes: B:D.151, B:H.189, ACT.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jordan, J.L. et al., Structural understanding of stabilization patterns in engineered bispecific Ig-like antibody molecules. Proteins (2009)

Release Date

2009-08-04

Peptides

IMMUNOGLOBULIN IGG1 FAB, HEAVY CHAIN: A
IMMUNOGLOBULIN IGG1 FAB, LIGHT CHAIN: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
L

IMMUNOGLOBULIN IGG1 FAB, HEAVY CHAIN

IMMUNOGLOBULIN IGG1 FAB, LIGHT CHAIN

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