SMTL ID : 3hd7.1 (1 other biounit)

HELICAL EXTENSION OF THE NEURONAL SNARE COMPLEX INTO THE MEMBRANE, spacegroup C 1 2 1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.40 Å

Oligo State

hetero-1-1-1-1-mer

Ligands

2 x GGG: glycylglycylglycine(Non-covalent)

GGG.1: 4 residues within 4Å: Chain A: K.60, R.61 Chain B: K.74, Y.78 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:K.74, B:Y.78, A:K.60 Salt bridges: A:R.61 GGG.2: 2 residues within 4Å: Chain A: W.64, N.67 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:W.64, A:W.64, A:N.67

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 1 residues within 4Å: Chain C: R.42 1 PLIP interactions: 1 interactions with chain C Salt bridges: C:R.42 SO4.4: 4 residues within 4Å: Chain C: N.65, K.69 Chain D: S.51, R.55 5 PLIP interactions: 2 interactions with chain C, 3 interactions with chain D Hydrogen bonds: C:N.65, D:S.51, D:S.51 Salt bridges: C:K.69, D:R.55

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stein, A. et al., Helical extension of the neuronal SNARE complex into the membrane. Nature (2009)

Release Date

2009-07-14

Peptides

Vesicle-associated membrane protein 2: A
Syntaxin-1A: B
Synaptosomal-associated protein 25: C
Synaptosomal-associated protein 25: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Membrane

We predict this structure to be a membrane protein.
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Vesicle-associated membrane protein 2

Syntaxin-1A

Synaptosomal-associated protein 25

Synaptosomal-associated protein 25

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