- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.36 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x GDU: GALACTOSE-URIDINE-5'-DIPHOSPHATE(Non-covalent)
GDU.1: 23 residues within 4Å:- Chain A: P.84, I.86, H.109, I.122, F.175, F.176, Y.179, T.180, Q.183, W.184, V.195, T.196, R.198, V.199, Y.209, F.210, T.294, N.296, R.305, Y.335, Y.370, N.372
- Ligands: FAD.2
21 PLIP interactions:21 interactions with chain A- Hydrogen bonds: A:F.175, A:T.180, A:T.180, A:T.180, A:R.198, A:T.294, A:N.296, A:R.305, A:Y.370, A:Y.370
- Water bridges: A:H.88, A:Q.183, A:R.198, A:R.364, A:R.364, A:N.372
- Salt bridges: A:R.198, A:R.198, A:R.305, A:R.305
- pi-Stacking: A:Y.179
GDU.3: 21 residues within 4Å:- Chain B: I.86, H.109, I.122, F.175, F.176, Y.179, T.180, Q.183, W.184, V.195, T.196, R.198, V.199, Y.209, F.210, N.296, R.305, Y.335, Y.370, N.372
- Ligands: FAD.4
23 PLIP interactions:23 interactions with chain B- Hydrogen bonds: B:H.109, B:F.175, B:T.180, B:T.180, B:R.198, B:N.296, B:Y.335, B:Y.370, B:N.372
- Water bridges: B:H.88, B:Q.183, B:R.198, B:R.305, B:R.305, B:R.364, B:R.364, B:R.364, B:Y.370
- Salt bridges: B:R.198, B:R.198, B:R.305, B:R.305
- pi-Stacking: B:Y.179
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
FAD.2: 32 residues within 4Å:- Chain A: V.35, G.36, G.38, F.39, A.40, D.59, R.60, R.61, G.66, N.67, Y.82, P.84, H.85, I.86, H.88, T.241, D.242, Y.243, T.258, G.259, L.277, E.325, Y.334, Y.335, G.363, R.364, L.365, Y.371, N.372, M.373, V.376
- Ligands: GDU.1
30 PLIP interactions:30 interactions with chain A- Hydrophobic interactions: A:L.277, A:Y.334
- Hydrogen bonds: A:G.38, A:F.39, A:A.40, A:R.60, A:R.60, A:R.61, A:R.61, A:N.67, A:N.67, A:H.85, A:I.86, A:I.86, A:D.242, A:Y.243, A:T.258, A:R.364, A:Y.371, A:M.373
- Water bridges: A:G.41, A:G.66, A:A.68, A:A.68, A:Y.257, A:Y.257, A:L.365, A:L.365
- pi-Stacking: A:H.85, A:H.85
FAD.4: 34 residues within 4Å:- Chain B: V.35, G.36, G.38, F.39, A.40, D.59, R.60, R.61, G.66, N.67, Y.82, P.84, H.85, I.86, H.88, T.241, D.242, Y.243, R.244, T.258, G.259, P.260, L.277, R.305, Y.334, Y.335, G.363, R.364, L.365, Y.371, N.372, M.373, V.376
- Ligands: GDU.3
31 PLIP interactions:31 interactions with chain B- Hydrophobic interactions: B:L.277, B:Y.334
- Hydrogen bonds: B:G.38, B:F.39, B:A.40, B:R.60, B:R.61, B:R.61, B:N.67, B:N.67, B:N.67, B:H.85, B:I.86, B:I.86, B:D.242, B:Y.243, B:R.364, B:Y.371, B:M.373
- Water bridges: B:G.41, B:G.66, B:A.68, B:A.68, B:R.198, B:T.258, B:L.365, B:L.365, B:D.374
- pi-Stacking: B:H.85, B:H.85
- pi-Cation interactions: B:R.60
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Partha, S.K. et al., Structural basis of substrate binding to UDP-galactopyranose mutase: crystal structures in the reduced and oxidized state complexed with UDP-galactopyranose and UDP. J.Mol.Biol. (2009)
- Release Date
- 2009-12-29
- Peptides
- UDP-galactopyranose mutase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
I
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.36 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x GDU: GALACTOSE-URIDINE-5'-DIPHOSPHATE(Non-covalent)
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Partha, S.K. et al., Structural basis of substrate binding to UDP-galactopyranose mutase: crystal structures in the reduced and oxidized state complexed with UDP-galactopyranose and UDP. J.Mol.Biol. (2009)
- Release Date
- 2009-12-29
- Peptides
- UDP-galactopyranose mutase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
I