SMTL ID : 3hem.1

Structure of Mycobacterium tuberculosis Mycolic Acid Cyclopropane Synthase CmaA2 in Complex with Dioctylamine

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.39 Å

Oligo State

homo-dimer

Ligands

2 x D22: N-octyloctan-1-amine(Non-covalent)

D22.1: 15 residues within 4Å: Chain A: Y.24, Y.41, G.145, E.148, H.149, I.184, L.211, F.215, G.218, L.220, Y.247, Y.280, C.284, F.288 Ligands: CO3.2 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Y.41, A:E.148, A:I.184, A:L.211, A:F.215, A:F.215, A:F.215, A:L.220, A:F.288 Hydrogen bonds: A:Y.24, A:G.145 D22.3: 15 residues within 4Å: Chain B: Y.24, Y.41, G.145, E.148, H.149, I.184, L.211, F.215, G.218, L.220, Y.247, Y.280, C.284, F.288 Ligands: CO3.4 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:Y.41, B:E.148, B:I.184, B:L.211, B:F.215, B:F.215, B:F.215, B:L.220, B:F.288 Hydrogen bonds: B:G.145

2 x CO3: CARBONATE ION(Non-functional Binders)

CO3.2: 8 residues within 4Å: Chain A: S.42, C.43, G.145, E.148, H.182, I.184, Y.247 Ligands: D22.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:C.43, A:E.148 CO3.4: 8 residues within 4Å: Chain B: S.42, C.43, G.145, E.148, H.182, I.184, Y.247 Ligands: D22.3 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:C.43, B:E.148, B:Y.247

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Barkan, D. et al., Structure of Mycobacterium tuberculosis Mycolic Acid Cyclopropane Synthase CmaA2 in Complex with Dioctylamine. TO BE PUBLISHED

Release Date

2009-06-16

Peptides

Cyclopropane-fatty-acyl-phospholipid synthase 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Cyclopropane-fatty-acyl-phospholipid synthase 2

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