SMTL ID : 3hjw.1

Structure of a functional ribonucleoprotein pseudouridine synthase bound to a substrate RNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain B: C.6, C.9, C.18, C.21 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.6, B:C.9, B:C.18, B:C.21

1 x K: POTASSIUM ION(Non-covalent)

K.2: 3 residues within 4Å: Chain A: Y.103, T.171 Chain E: U.6 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:T.171, H2O.4, H2O.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liang, B. et al., Structure of a functional ribonucleoprotein pseudouridine synthase bound to a substrate RNA. Nat.Struct.Mol.Biol. (2009)

Release Date

2009-06-23

Peptides

Pseudouridine synthase Cbf5: A
Ribosome biogenesis protein Nop10: B
50S ribosomal protein L7Ae: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Pseudouridine synthase Cbf5

Ribosome biogenesis protein Nop10

50S ribosomal protein L7Ae

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