SMTL ID : 3hng.1

Crystal structure of VEGFR1 in complex with N-(4-Chlorophenyl)-2-((pyridin-4-ylmethyl)amino)benzamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x 8ST: N-(4-chlorophenyl)-2-[(pyridin-4-ylmethyl)amino]benzamide(Non-covalent)

8ST.1: 18 residues within 4Å: Chain A: L.35, V.43, A.61, K.63, E.80, L.84, V.109, V.111, E.112, Y.113, C.114, L.215, H.222, L.231, I.240, C.241, D.242, F.243 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:V.43, A:K.63, A:E.80, A:L.84, A:V.109, A:V.111, A:V.111, A:L.231, A:D.242 Hydrogen bonds: A:E.80, A:E.80, A:C.114, A:D.242

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 2 residues within 4Å: Chain A: K.52, L.97 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tresaugues, L. et al., Crystal structure of VEGFR1 in complex with N-(4-Chlorophenyl)-2-((pyridin-4-ylmethyl)amino)benzamide. To be Published

Release Date

2009-06-30

Peptides

Vascular endothelial growth factor receptor 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Vascular endothelial growth factor receptor 1