SMTL ID : 3ho9.1

Structure of E.coli FabF(C163A) in complex with Platencin A1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

2 x N3A: 2,4-dihydroxy-3-({3-[(2R,4aR,8S,8aR,9R)-9-hydroxy-8-methyl-3-methylidene-7-oxo-1,3,4,7,8,8a-hexahydro-2H-2,4a-ethanonap hthalen-8-yl]propanoyl}amino)benzoic acid(Non-covalent)

N3A.1: 18 residues within 4Å: Chain A: A.178, A.220, R.221, F.244, H.283, T.285, S.286, P.287, H.318, T.320, T.322, P.323, A.324, G.325, H.355, F.413, G.414, F.415 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:T.322 Hydrogen bonds: A:R.221, A:R.221, A:T.285, A:T.285, A:T.322, A:A.324, A:G.325 Water bridges: A:S.286, A:T.320, A:T.320, A:G.417 Salt bridges: A:H.318, A:H.355 pi-Stacking: A:F.415 N3A.2: 18 residues within 4Å: Chain B: A.178, A.220, R.221, F.244, H.283, T.285, S.286, P.287, H.318, T.320, T.322, P.323, A.324, G.325, H.355, F.413, G.414, F.415 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:T.322 Hydrogen bonds: B:R.221, B:R.221, B:T.285, B:T.285, B:T.322, B:A.324, B:G.325 Water bridges: B:S.286, B:G.417 Salt bridges: B:H.318, B:H.355 pi-Stacking: B:F.415

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Singh, S.B. et al., Isolation, enzyme-bound structure and antibacterial activity of platencin A1 from Streptomyces platensis. Bioorg.Med.Chem.Lett. (2009)

Release Date

2010-02-09

Peptides

3-oxoacyl-[acyl-carrier-protein] synthase 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

3-oxoacyl-[acyl-carrier-protein] synthase 2

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