- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.90 Å
- Oligo State
- homo-tetramer
- Ligands
- 14 x ZN: ZINC ION(Non-covalent)
- 4 x PO4: PHOSPHATE ION(Non-functional Binders)
PO4.2: 7 residues within 4Å:- Chain A: P.235, H.265, E.266, H.269, E.295, Y.420
- Ligands: ZN.1
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:E.266, A:E.295, A:Y.420, A:Y.420
- Water bridges: A:R.348
- Salt bridges: A:H.265, A:H.269
PO4.11: 7 residues within 4Å:- Chain B: P.235, H.265, E.266, H.269, E.295, Y.420
- Ligands: ZN.10
8 PLIP interactions:8 interactions with chain B- Hydrogen bonds: B:E.266, B:E.295, B:Y.420, B:Y.420
- Water bridges: B:R.348, B:R.348
- Salt bridges: B:H.265, B:H.269
PO4.19: 7 residues within 4Å:- Chain C: P.235, H.265, E.266, H.269, E.295, Y.420
- Ligands: ZN.18
7 PLIP interactions:7 interactions with chain C- Hydrogen bonds: C:E.266, C:E.295, C:Y.420
- Water bridges: C:E.266, C:R.348
- Salt bridges: C:H.265, C:H.269
PO4.28: 7 residues within 4Å:- Chain D: P.235, H.265, E.266, H.269, E.295, Y.420
- Ligands: ZN.27
7 PLIP interactions:7 interactions with chain D- Hydrogen bonds: D:E.266, D:E.295, D:Y.420
- Water bridges: D:R.348, D:R.348
- Salt bridges: D:H.265, D:H.269
- 14 x CL: CHLORIDE ION(Non-functional Binders)
CL.4: 4 residues within 4Å:- Chain A: H.28, E.114
- Ligands: ZN.3, CL.5
Ligand excluded by PLIPCL.5: 4 residues within 4Å:- Chain A: H.28, E.114
- Ligands: ZN.3, CL.4
Ligand excluded by PLIPCL.7: 9 residues within 4Å:- Chain A: K.309, H.310
- Chain C: K.309, H.310
- Ligands: ZN.6, ZN.8, ZN.23, CL.24, ZN.25
Ligand excluded by PLIPCL.9: 9 residues within 4Å:- Chain A: H.310, D.442
- Chain C: H.310, D.442
- Ligands: ZN.6, ZN.8, ZN.23, ZN.25, CL.26
Ligand excluded by PLIPCL.13: 3 residues within 4Å:- Chain B: H.28, E.114
- Ligands: ZN.12
Ligand excluded by PLIPCL.15: 2 residues within 4Å:- Chain B: E.449
- Ligands: ZN.14
Ligand excluded by PLIPCL.16: 4 residues within 4Å:- Chain B: H.28, E.114, F.236
- Ligands: ZN.12
Ligand excluded by PLIPCL.21: 4 residues within 4Å:- Chain C: H.28, E.114
- Ligands: ZN.20, CL.22
Ligand excluded by PLIPCL.22: 4 residues within 4Å:- Chain C: H.28, E.114
- Ligands: ZN.20, CL.21
Ligand excluded by PLIPCL.24: 9 residues within 4Å:- Chain A: K.309, H.310
- Chain C: K.309, H.310
- Ligands: ZN.6, CL.7, ZN.8, ZN.23, ZN.25
Ligand excluded by PLIPCL.26: 9 residues within 4Å:- Chain A: H.310, D.442
- Chain C: H.310, D.442
- Ligands: ZN.6, ZN.8, CL.9, ZN.23, ZN.25
Ligand excluded by PLIPCL.30: 3 residues within 4Å:- Chain D: H.28, E.114
- Ligands: ZN.29
Ligand excluded by PLIPCL.32: 2 residues within 4Å:- Chain D: E.449
- Ligands: ZN.31
Ligand excluded by PLIPCL.33: 4 residues within 4Å:- Chain D: H.28, E.114, F.236
- Ligands: ZN.29
Ligand excluded by PLIP- 2 x F: FLUORIDE ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lee, M.M. et al., Insight into the substrate length restriction of M32 carboxypeptidases: Characterization of two distinct subfamilies. Proteins (2009)
- Release Date
- 2009-06-30
- Peptides
- Bacillus subtilis M32 carboxypeptidase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.90 Å
- Oligo State
- homo-tetramer
- Ligands
- 14 x ZN: ZINC ION(Non-covalent)
- 4 x PO4: PHOSPHATE ION(Non-functional Binders)
- 14 x CL: CHLORIDE ION(Non-functional Binders)
- 2 x F: FLUORIDE ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lee, M.M. et al., Insight into the substrate length restriction of M32 carboxypeptidases: Characterization of two distinct subfamilies. Proteins (2009)
- Release Date
- 2009-06-30
- Peptides
- Bacillus subtilis M32 carboxypeptidase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B