- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 6 x GOL: GLYCEROL(Non-functional Binders)
- 4 x SO4: SULFATE ION(Non-functional Binders)
SO4.3: 8 residues within 4Å:- Chain A: S.401, N.402, T.403, R.405, S.406, A.482, D.483, H.484
14 PLIP interactions:14 interactions with chain A- Hydrogen bonds: A:N.402, A:T.403, A:T.403, A:G.404, A:R.405, A:S.406, A:D.483, A:H.484
- Water bridges: A:S.406, A:S.406, A:H.484, A:H.484, A:H.484
- Salt bridges: A:H.484
SO4.7: 5 residues within 4Å:- Chain B: S.401, N.402, T.403, R.405, S.406
7 PLIP interactions:7 interactions with chain B- Hydrogen bonds: B:S.401, B:N.402, B:T.403, B:G.404, B:R.405, B:S.406, B:S.406
SO4.12: 8 residues within 4Å:- Chain C: S.401, N.402, T.403, R.405, S.406, A.482, D.483, H.484
14 PLIP interactions:14 interactions with chain C- Hydrogen bonds: C:N.402, C:T.403, C:T.403, C:G.404, C:R.405, C:S.406, C:D.483, C:H.484
- Water bridges: C:S.406, C:S.406, C:H.484, C:H.484, C:H.484
- Salt bridges: C:H.484
SO4.16: 5 residues within 4Å:- Chain D: S.401, N.402, T.403, R.405, S.406
7 PLIP interactions:7 interactions with chain D- Hydrogen bonds: D:S.401, D:N.402, D:T.403, D:G.404, D:R.405, D:S.406, D:S.406
- 8 x K: POTASSIUM ION(Non-covalent)
K.4: 4 residues within 4Å:- Chain A: Q.355, S.356, L.358, E.360
4 PLIP interactions:3 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:Q.355, A:L.358, A:E.360, H2O.15
K.5: 6 residues within 4Å:- Chain A: N.52, S.54, D.84, T.85, K.239
- Ligands: GOL.1
3 PLIP interactions:3 interactions with chain A- Metal complexes: A:S.54, A:D.84, A:T.85
K.8: 4 residues within 4Å:- Chain B: Q.355, S.356, L.358, E.360
5 PLIP interactions:3 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:Q.355, B:L.358, B:E.360, H2O.23, H2O.27
K.9: 6 residues within 4Å:- Chain B: N.52, S.54, D.84, T.85, S.212, K.239
4 PLIP interactions:3 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:S.54, B:D.84, B:T.85, H2O.22
K.13: 4 residues within 4Å:- Chain C: Q.355, S.356, L.358, E.360
4 PLIP interactions:3 interactions with chain C, 1 Ligand-Water interactions- Metal complexes: C:Q.355, C:L.358, C:E.360, H2O.43
K.14: 6 residues within 4Å:- Chain C: N.52, S.54, D.84, T.85, K.239
- Ligands: GOL.10
3 PLIP interactions:3 interactions with chain C- Metal complexes: C:S.54, C:D.84, C:T.85
K.17: 4 residues within 4Å:- Chain D: Q.355, S.356, L.358, E.360
5 PLIP interactions:3 interactions with chain D, 2 Ligand-Water interactions- Metal complexes: D:Q.355, D:L.358, D:E.360, H2O.51, H2O.55
K.18: 6 residues within 4Å:- Chain D: N.52, S.54, D.84, T.85, S.212, K.239
4 PLIP interactions:3 interactions with chain D, 1 Ligand-Water interactions- Metal complexes: D:S.54, D:D.84, D:T.85, H2O.51
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Morgan, H.P. et al., The allosteric mechanism of pryuvate kinase from Leishmania mexicana: a rock and lock model. J.Biol.Chem. (2010)
- Release Date
- 2010-02-16
- Peptides
- Pyruvate kinase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
DB
AC
DD
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 6 x GOL: GLYCEROL(Non-functional Binders)
- 4 x SO4: SULFATE ION(Non-functional Binders)
- 8 x K: POTASSIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Morgan, H.P. et al., The allosteric mechanism of pryuvate kinase from Leishmania mexicana: a rock and lock model. J.Biol.Chem. (2010)
- Release Date
- 2010-02-16
- Peptides
- Pyruvate kinase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
DB
AC
DD
A