SMTL ID : 3hqu.1

PHD2:Fe:UN9:partial HIF1-alpha substrate complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-1-1-mer

Ligands

1 x FE2: FE (II) ION(Non-covalent)

FE2.1: 4 residues within 4Å: Chain A: H.133, D.135, H.194 Ligands: UN9.2 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.133, A:D.135, A:H.194, H2O.1

1 x UN9: N-[(1-CHLORO-4-HYDROXYISOQUINOLIN-3-YL)CARBONYL]GLYCINE(Non-covalent)

UN9.2: 13 residues within 4Å: Chain A: D.74, I.76, M.119, Y.123, Y.130, H.133, D.135, Y.149, L.163, H.194, V.196, R.203 Ligands: FE2.1 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:I.76 Hydrogen bonds: A:Y.123, A:Y.149 Water bridges: A:T.207, A:T.207 Salt bridges: A:R.203 pi-Stacking: A:Y.130, A:Y.130

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chowdhury, R. et al., Structural basis for binding of hypoxia-inducible factor to the oxygen-sensing prolyl hydroxylases. Structure (2009)

Release Date

2009-07-28

Peptides

Egl nine homolog 1: A
Hypoxia-inducible factor 1 alpha: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
S

Egl nine homolog 1

Hypoxia-inducible factor 1 alpha

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