SMTL ID : 3hrh.3 (2 other biounits)

Crystal Structure of Antigen 85C and Glycerol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

20 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: G.40, L.41, R.42, S.125, W.263 Ligands: GOL.4 Ligand excluded by PLIP GOL.2: 9 residues within 4Å: Chain A: F.77, Y.78, T.79, E.97, S.130, I.133, L.134, W.179, N.190 Ligand excluded by PLIP GOL.3: 6 residues within 4Å: Chain A: P.160, G.164, A.175, N.176, G.180, W.187 Ligand excluded by PLIP GOL.4: 10 residues within 4Å: Chain A: D.39, G.40, R.42, A.43, Q.44, G.49, I.52, N.53, W.263 Ligands: GOL.1 Ligand excluded by PLIP GOL.5: 6 residues within 4Å: Chain B: G.40, L.41, R.42, S.125, W.263 Ligands: GOL.6 Ligand excluded by PLIP GOL.6: 9 residues within 4Å: Chain B: D.39, G.40, R.42, A.43, Q.44, I.52, N.53, W.263 Ligands: GOL.5 Ligand excluded by PLIP GOL.7: 4 residues within 4Å: Chain B: Y.11, Y.47, D.51 Ligands: GOL.10 Ligand excluded by PLIP GOL.8: 6 residues within 4Å: Chain B: R.21, D.22, I.23, K.24, V.71, Y.92 Ligand excluded by PLIP GOL.9: 3 residues within 4Å: Chain B: P.8, V.9, E.10 Ligand excluded by PLIP GOL.10: 6 residues within 4Å: Chain B: L.7, V.9, Y.11, Q.26, D.51 Ligands: GOL.7 Ligand excluded by PLIP GOL.11: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP GOL.12: 9 residues within 4Å: Chain B: F.77, M.126, G.129, S.130, F.151, P.154, W.179, N.190 Ligands: GOL.13 Ligand excluded by PLIP GOL.13: 11 residues within 4Å: Chain B: F.77, Y.78, T.79, E.97, S.130, I.133, L.134, W.179, R.189, N.190 Ligands: GOL.12 Ligand excluded by PLIP GOL.14: 6 residues within 4Å: Chain B: Y.209, S.216, D.217, L.218, Y.265, E.268 Ligand excluded by PLIP GOL.15: 2 residues within 4Å: Chain B: R.240, F.253 Ligand excluded by PLIP GOL.16: 4 residues within 4Å: Chain B: R.42, A.43, Q.44, Q.74 Ligand excluded by PLIP GOL.17: 4 residues within 4Å: Chain A: D.221, N.222, I.223 Chain B: R.42 Ligand excluded by PLIP GOL.18: 6 residues within 4Å: Chain A: N.168, D.169, G.171, G.172 Chain B: T.214, K.226 Ligand excluded by PLIP GOL.19: 3 residues within 4Å: Chain B: P.55, E.58, E.59 Ligand excluded by PLIP GOL.20: 2 residues within 4Å: Chain B: E.268, A.272 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sanki, A.K. et al., Design, synthesis and biological evaluation of sugar-derived esters, alpha-ketoesters and alpha-ketoamides as inhibitors for Mycobacterium tuberculosis antigen 85C. Mol Biosyst (2009)

Release Date

2009-09-29

Peptides

Antigen 85-C: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Antigen 85-C

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