SMTL ID : 3hzo.1

Rv0554 from Mycobacterium tuberculosis - the structure solved from the tetragonal crystal form

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-dimer

Ligands

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 8 residues within 4Å: Chain A: A.36, Y.37, D.38, G.56, R.57, T.76, F.77, D.78 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.76 Water bridges: A:L.20, A:Y.37, A:R.57 EDO.2: 7 residues within 4Å: Chain A: F.77, N.79, R.80, M.96, D.99, T.100, I.123 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.80, A:D.99

1 x NA: SODIUM ION(Non-functional Binders)

NA.3: 4 residues within 4Å: Chain A: A.254, D.255, L.257, G.260 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.260, A:G.260 Water bridges: A:D.255

1 x MLA: MALONIC ACID(Non-covalent)

MLA.4: 7 residues within 4Å: Chain B: G.51, R.52, S.118, M.119, R.151, F.154, H.270 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:R.52 Hydrogen bonds: B:R.52, B:S.118, B:M.119 Water bridges: B:R.151 Salt bridges: B:R.151, B:H.270

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Johnston, J.M. et al., The structure of Rv0554 from Mycobacterium tuberculosis. To be Published

Release Date

2010-06-02

Peptides

protein Rv0554, putative Bromoperoxidase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

protein Rv0554, putative Bromoperoxidase

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