SMTL ID : 3i31.1

Hera helicase RNA binding domain is an RRM fold

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 2 residues within 4Å: Chain A: E.46 Ligands: TRS.5 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.46, A:E.46, H2O.1, H2O.2

3 x NA: SODIUM ION(Non-functional Binders)

NA.2: 2 residues within 4Å: Chain A: R.4, E.11 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.4 Water bridges: A:E.11, A:E.11 NA.3: 2 residues within 4Å: Chain A: E.44 Ligands: NA.4 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.44 NA.4: 1 residues within 4Å: Ligands: NA.3 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.44

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.5: 2 residues within 4Å: Chain A: E.46 Ligands: ZN.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.46

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rudolph, M.G. et al., The Thermus thermophilus DEAD box helicase Hera contains a modified RNA recognition motif domain loosely connected to the helicase core. Rna (2009)

Release Date

2009-09-22

Peptides

Heat resistant RNA dependent ATPase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Heat resistant RNA dependent ATPase