- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.36 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x GNP: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER(Non-covalent)
- 18 x MG: MAGNESIUM ION(Non-covalent)
MG.2: 3 residues within 4Å:- Chain A: S.17, T.35
- Ligands: GNP.1
4 PLIP interactions:2 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:S.17, A:T.35, H2O.1, H2O.1
MG.4: 1 residues within 4Å:- Chain A: Q.129
No protein-ligand interaction detected (PLIP)MG.5: 5 residues within 4Å:- Chain A: R.102, D.105
- Chain D: R.102, D.105
- Ligands: MG.20
6 PLIP interactions:1 interactions with chain D, 1 interactions with chain A, 4 Ligand-Water interactions- Metal complexes: D:R.102, A:R.102, H2O.4, H2O.4, H2O.16, H2O.16
MG.7: 3 residues within 4Å:- Chain B: S.17, T.35
- Ligands: GNP.6
4 PLIP interactions:2 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:S.17, B:T.35, H2O.4, H2O.4
MG.9: 1 residues within 4Å:- Chain B: Q.129
No protein-ligand interaction detected (PLIP)MG.10: 5 residues within 4Å:- Chain B: R.102, D.105
- Chain F: R.102, D.105
- Ligands: MG.30
6 PLIP interactions:1 interactions with chain F, 1 interactions with chain B, 4 Ligand-Water interactions- Metal complexes: F:R.102, B:R.102, H2O.8, H2O.8, H2O.24, H2O.24
MG.12: 3 residues within 4Å:- Chain C: S.17, T.35
- Ligands: GNP.11
4 PLIP interactions:2 interactions with chain C, 2 Ligand-Water interactions- Metal complexes: C:S.17, C:T.35, H2O.8, H2O.8
MG.14: 1 residues within 4Å:- Chain C: Q.129
No protein-ligand interaction detected (PLIP)MG.15: 5 residues within 4Å:- Chain C: R.102, D.105
- Chain E: R.102, D.105
- Ligands: MG.25
6 PLIP interactions:1 interactions with chain C, 1 interactions with chain E, 4 Ligand-Water interactions- Metal complexes: C:R.102, E:R.102, H2O.12, H2O.12, H2O.20, H2O.20
MG.17: 3 residues within 4Å:- Chain D: S.17, T.35
- Ligands: GNP.16
4 PLIP interactions:2 interactions with chain D, 2 Ligand-Water interactions- Metal complexes: D:S.17, D:T.35, H2O.12, H2O.12
MG.19: 1 residues within 4Å:- Chain D: Q.129
No protein-ligand interaction detected (PLIP)MG.20: 5 residues within 4Å:- Chain A: R.102, D.105
- Chain D: R.102, D.105
- Ligands: MG.5
6 PLIP interactions:1 interactions with chain A, 1 interactions with chain D, 4 Ligand-Water interactions- Metal complexes: A:R.102, D:R.102, H2O.4, H2O.4, H2O.16, H2O.16
MG.22: 3 residues within 4Å:- Chain E: S.17, T.35
- Ligands: GNP.21
4 PLIP interactions:2 interactions with chain E, 2 Ligand-Water interactions- Metal complexes: E:S.17, E:T.35, H2O.16, H2O.16
MG.24: 1 residues within 4Å:- Chain E: Q.129
No protein-ligand interaction detected (PLIP)MG.25: 5 residues within 4Å:- Chain C: R.102, D.105
- Chain E: R.102, D.105
- Ligands: MG.15
6 PLIP interactions:1 interactions with chain E, 1 interactions with chain C, 4 Ligand-Water interactions- Metal complexes: E:R.102, C:R.102, H2O.12, H2O.12, H2O.20, H2O.20
MG.27: 3 residues within 4Å:- Chain F: S.17, T.35
- Ligands: GNP.26
4 PLIP interactions:2 interactions with chain F, 2 Ligand-Water interactions- Metal complexes: F:S.17, F:T.35, H2O.20, H2O.20
MG.29: 1 residues within 4Å:- Chain F: Q.129
No protein-ligand interaction detected (PLIP)MG.30: 5 residues within 4Å:- Chain B: R.102, D.105
- Chain F: R.102, D.105
- Ligands: MG.10
6 PLIP interactions:1 interactions with chain B, 1 interactions with chain F, 4 Ligand-Water interactions- Metal complexes: B:R.102, F:R.102, H2O.8, H2O.8, H2O.24, H2O.24
- 6 x CA: CALCIUM ION(Non-covalent)
CA.3: 4 residues within 4Å:- Chain A: F.28, D.30
- Chain F: E.31, D.33
5 PLIP interactions:1 interactions with chain F, 2 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: F:E.31, A:F.28, A:D.30, H2O.1, H2O.2
CA.8: 4 residues within 4Å:- Chain B: F.28, D.30
- Chain E: E.31, D.33
5 PLIP interactions:1 interactions with chain E, 2 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: E:E.31, B:F.28, B:D.30, H2O.5, H2O.6
CA.13: 4 residues within 4Å:- Chain C: F.28, D.30
- Chain D: E.31, D.33
5 PLIP interactions:2 interactions with chain C, 1 interactions with chain D, 2 Ligand-Water interactions- Metal complexes: C:F.28, C:D.30, D:E.31, H2O.9, H2O.10
CA.18: 4 residues within 4Å:- Chain C: E.31, D.33
- Chain D: F.28, D.30
5 PLIP interactions:1 interactions with chain C, 2 interactions with chain D, 2 Ligand-Water interactions- Metal complexes: C:E.31, D:F.28, D:D.30, H2O.13, H2O.14
CA.23: 4 residues within 4Å:- Chain B: E.31, D.33
- Chain E: F.28, D.30
5 PLIP interactions:2 interactions with chain E, 1 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: E:F.28, E:D.30, B:E.31, H2O.17, H2O.18
CA.28: 4 residues within 4Å:- Chain A: E.31, D.33
- Chain F: F.28, D.30
5 PLIP interactions:2 interactions with chain F, 1 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: F:F.28, F:D.30, A:E.31, H2O.21, H2O.22
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Cirstea, I.C. et al., A restricted spectrum of NRAS mutations causes Noonan syndrome. Nat.Genet. (2010)
- Release Date
- 2009-12-22
- Peptides
- GTPase HRas: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
RB
RC
RD
RE
RF
R
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.36 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x GNP: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER(Non-covalent)
- 18 x MG: MAGNESIUM ION(Non-covalent)
- 6 x CA: CALCIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Cirstea, I.C. et al., A restricted spectrum of NRAS mutations causes Noonan syndrome. Nat.Genet. (2010)
- Release Date
- 2009-12-22
- Peptides
- GTPase HRas: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
RB
RC
RD
RE
RF
R